track HiFi_DNA
type bam
bigDataUrl sorted_map_reads_megansivi.bam
shortLabel HiFi DNA
longLabel HiFi DNA
visibility dense
color 70,0,185
priority 2
group DNA-seq

track hifi_DNA_density
type bigWig
bigDataUrl sorted_map_reads_megansivi.bw
shortLabel HiFi DNA dens
longLabel HiFi DNA density
visibility full
color 70,0,185
priority 1
group DNA-seq
height 64

track Illumina_RNA
type bam
bigDataUrl sorted_map_rna_megansivi.bam
shortLabel Illumina RNA
longLabel Illumina RNA
visibility dense
color 215,0,40
priority 2
group RNA-seq

track Illumina_RNA_density
type bigWig
bigDataUrl sorted_map_rna_megansivi.bw
shortLabel Illumina RNA dens
longLabel Illumina RNA density
visibility full
color 215,0,40
priority 1
group RNA-seq
height 64

track Protein_coding_genes
type bigBed
bigDataUrl sivi_proteins.bb
shortLabel Augustus PCG
longLabel Augustus protein-coding genes
visibility squish
color 50,155,50
priority 1
group Annotation

track Repeats
type bigBed
bigDataUrl sorted_reference-genome.reps.bb
shortLabel Repeats
longLabel RepeatModeler repeats
visibility squish
color 50,155,50
priority 2
group Annotation

track Large_variants
type vcfTabix
bigDataUrl pbsv.vcf.gz
shortLabel Variants
longLabel PBSV-called variants
visibility squish
color 255,165,0
priority 1
group Variation 
hapClusterEnabled true